EnhancerDB
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  3. rs556733211[chr1:27891456]
Enhancers that have rs556733211[chr1:27891456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs556733211[chr1:27891456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802590
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802591
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802592
chr1 27891444 27891459 TFAP2A JASPAR yes 27709749
chr1 27891450 27891463 NR2F1 JASPAR yes 27709750
chr1 27891451 27891459 CREB1 JASPAR yes 27709751
chr1 27891452 27891460 NR4A2 JASPAR yes 27709752
chr1 27891453 27891468 ESR2 JASPAR yes 27709753
chr1 27891454 27891458 ESR1 TRANSFAC yes 27709754
Genes associated with rs556733211[chr1:27891456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More