EnhancerDB
  1. Home
  2. SNP
  3. rs55673946[chr1:205250475]
Enhancers that have rs55673946[chr1:205250475]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205243649 205259635 enh893
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Heart
Transcript factors that have rs55673946[chr1:205250475]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205248462 205251020 ZNF143 GTRD no Epithelial (MCF-7) 21371243
chr1 205250425 205251057 ZNF274 GTRD no Bone Marrow (K562) 21371301
chr1 205250457 205250477 RREB1 JASPAR yes 34750842
Genes associated with rs55673946[chr1:205250475], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More