EnhancerDB
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  3. rs55674140[chr1:232770250]
Enhancers that have rs55674140[chr1:232770250]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs55674140[chr1:232770250]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232770231 232770252 IRF1 JASPAR yes 36180163
chr1 232770232 232770253 IRF1 JASPAR yes 36180165
chr1 232770236 232770257 IRF1 JASPAR yes 36180166
chr1 232770238 232770253 PRDM1 JASPAR yes 36180167
chr1 232770238 232770253 STAT2 JASPAR yes 36180168
chr1 232770239 232770253 SPIC JASPAR yes 36180169
chr1 232770239 232770253 STAT1 JASPAR yes 36180170
chr1 232770240 232770261 IRF1 JASPAR yes 36180171
chr1 232770241 232770256 FOXP1 JASPAR yes 36180172
chr1 232770241 232770262 IRF1 JASPAR yes 36180173
chr1 232770242 232770263 IRF1 JASPAR yes 36180174
chr1 232770243 232770258 FOXP1 JASPAR yes 36180175
chr1 232770245 232770260 FOXP1 JASPAR yes 36180176
chr1 232770246 232770261 FOXP1 JASPAR yes 36180177
chr1 232770247 232770262 FOXP1 JASPAR yes 36180178
chr1 232770248 232770263 FOXP1 JASPAR yes 36180179
chr1 232770249 232770264 FOXP1 JASPAR yes 36180180
chr1 232770250 232770265 FOXP1 JASPAR yes 36180181
Genes associated with rs55674140[chr1:232770250], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More