EnhancerDB
  1. Home
  2. SNP
  3. rs55675854[chr19:13958508]
Enhancers that have rs55675854[chr19:13958508]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr19 13957204 13959386 vista28720
VISTA
Transcript factors that have rs55675854[chr19:13958508]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13957196 13959039 POLR2A UCSC Txn Factor no Conserved 108390205
chr19 13957253 13958944 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852271
chr19 13957253 13958944 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390211
chr19 13957272 13959000 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852277
chr19 13957272 13959000 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390218
chr19 13957670 13958708 ZNF274 GTRD no Bone Marrow (K562) 21852348
chr19 13957670 13958708 ZNF274 GTRD no Bone Marrow (K562) 108390301
chr19 13957697 13959023 ZNF274 GTRD no Bone Marrow (K562) 21852353
chr19 13957697 13959023 ZNF274 GTRD no Bone Marrow (K562) 108390307
chr19 13957833 13958890 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390349
chr19 13957864 13958516 ZNF274 GTRD no Bone Marrow (K562) 21852384
chr19 13957864 13958516 ZNF274 GTRD no Bone Marrow (K562) 108390353
chr19 13957881 13958537 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21852386
chr19 13957881 13958537 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108390355
chr19 13957887 13958532 ZNF143 GTRD no Epithelial (MCF-7) 21852388
chr19 13957887 13958532 ZNF143 GTRD no Epithelial (MCF-7) 108390357
chr19 13957898 13958668 ZNF274 GTRD no Bone Marrow (K562) 21852390
chr19 13957898 13958668 ZNF274 GTRD no Bone Marrow (K562) 108390360
chr19 13957902 13958821 ZNF274 GTRD no Bone Marrow (K562) 21852391
chr19 13957902 13958821 ZNF274 GTRD no Bone Marrow (K562) 108390361
chr19 13957919 13958937 ZNF274 GTRD no Bone Marrow (K562) 21852393
chr19 13957919 13958937 ZNF274 GTRD no Bone Marrow (K562) 108390363
chr19 13957923 13958657 ZNF274 GTRD no Bone Marrow (K562) 21852397
chr19 13957923 13958657 ZNF274 GTRD no Bone Marrow (K562) 108390367
chr19 13957924 13958543 ZNF274 GTRD no Bone Marrow (K562) 21852398
chr19 13957924 13958543 ZNF274 GTRD no Bone Marrow (K562) 108390368
chr19 13958158 13958662 ZNF274 GTRD no Bone Marrow (K562) 21852435
chr19 13958158 13958662 ZNF274 GTRD no Bone Marrow (K562) 108390411
chr19 13958159 13958849 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852436
chr19 13958159 13958849 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390412
chr19 13958176 13958702 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852440
chr19 13958176 13958702 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390416
chr19 13958234 13958918 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852441
chr19 13958234 13958918 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390417
chr19 13958265 13958841 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852442
chr19 13958265 13958841 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390418
chr19 13958299 13958823 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21852443
chr19 13958299 13958823 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108390419
chr19 13958304 13958820 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852444
chr19 13958304 13958820 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390420
chr19 13958304 13958854 TCF7L2 UCSC Txn Factor no Conserved 108390421
chr19 13958310 13958910 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390422
chr19 13958316 13958692 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852445
chr19 13958316 13958692 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390423
chr19 13958317 13958807 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852446
chr19 13958317 13958807 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390424
chr19 13958346 13959070 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852447
chr19 13958346 13959070 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390425
chr19 13958363 13958663 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852448
chr19 13958363 13958663 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390426
chr19 13958367 13958787 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852449
chr19 13958367 13958787 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108390427
chr19 13958379 13958909 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852450
chr19 13958379 13958909 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390428
chr19 13958380 13958816 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108390429
chr19 13958393 13958889 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852451
chr19 13958393 13958889 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390430
chr19 13958403 13958723 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852452
chr19 13958403 13958723 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390431
chr19 13958404 13958782 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390432
chr19 13958405 13958792 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390433
chr19 13958413 13958793 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852453
chr19 13958413 13958793 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390434
chr19 13958419 13958703 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21852454
chr19 13958419 13958703 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108390435
chr19 13958425 13958781 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390436
chr19 13958428 13958944 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852455
chr19 13958428 13958944 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390437
chr19 13958431 13958728 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852456
chr19 13958431 13958728 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390438
chr19 13958431 13958787 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852457
chr19 13958431 13958787 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390439
chr19 13958431 13958871 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852458
chr19 13958431 13958871 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390440
chr19 13958434 13958750 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852459
chr19 13958434 13958750 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108390441
chr19 13958434 13958762 GABPA UCSC Txn Factor no Conserved 108390442
chr19 13958437 13958813 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852460
chr19 13958437 13958813 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390443
chr19 13958440 13958904 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852461
chr19 13958440 13958904 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390444
chr19 13958443 13958819 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390445
chr19 13958445 13958805 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852462
chr19 13958445 13958805 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390446
chr19 13958448 13958786 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852463
chr19 13958448 13958786 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390447
chr19 13958449 13958925 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852464
chr19 13958449 13958925 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390448
chr19 13958454 13958758 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852465
chr19 13958454 13958758 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390449
chr19 13958455 13958757 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852466
chr19 13958455 13958757 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390450
chr19 13958455 13958765 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390451
chr19 13958456 13958716 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852467
chr19 13958456 13958716 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390452
chr19 13958462 13958898 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852468
chr19 13958462 13958898 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390453
chr19 13958466 13958762 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852469
chr19 13958466 13958762 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390454
chr19 13958468 13958778 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21852470
chr19 13958468 13958778 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108390455
chr19 13958470 13958753 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108390456
chr19 13958470 13958850 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852471
chr19 13958470 13958850 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390457
chr19 13958472 13958686 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21852472
chr19 13958472 13958686 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108390458
chr19 13958472 13958732 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390459
chr19 13958475 13958737 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21852473
chr19 13958475 13958737 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108390460
chr19 13958479 13958755 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852474
chr19 13958479 13958755 ELF1 UCSC Txn Factor no Conserved 108390461
chr19 13958479 13958755 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108390462
chr19 13958480 13958804 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852475
chr19 13958480 13958804 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390463
chr19 13958480 13958816 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852476
chr19 13958480 13958816 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390464
chr19 13958483 13958730 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852477
chr19 13958483 13958730 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390465
chr19 13958484 13958880 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852478
chr19 13958484 13958880 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390466
chr19 13958486 13958819 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852479
chr19 13958486 13958819 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390467
chr19 13958487 13958827 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852480
chr19 13958487 13958827 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390468
chr19 13958489 13959222 ZNF263 UCSC Txn Factor no Conserved 108390469
chr19 13958492 13958756 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852481
chr19 13958492 13958756 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390470
chr19 13958493 13958741 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852482
chr19 13958493 13958741 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390471
chr19 13958493 13958823 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852483
chr19 13958493 13958823 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390472
chr19 13958496 13958772 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852484
chr19 13958496 13958772 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390473
chr19 13958498 13958511 NFKB1 JASPAR yes 70810656
chr19 13958498 13958511 NFKB2 JASPAR yes 70810657
chr19 13958498 13958511 NFKB1 JASPAR yes 112537887
chr19 13958498 13958511 NFKB2 JASPAR yes 112537888
chr19 13958502 13958706 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852485
chr19 13958502 13958706 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390474
chr19 13958502 13958727 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852486
chr19 13958502 13958727 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390475
chr19 13958502 13958802 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852487
chr19 13958502 13958802 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390476
chr19 13958503 13958509 ZNF354C JASPAR yes 70810658
chr19 13958503 13958509 ZNF354C JASPAR yes 112537889
chr19 13958505 13958525 RREB1 JASPAR yes 70810659
chr19 13958505 13958525 RREB1 JASPAR yes 112537890
chr19 13958507 13958527 RREB1 JASPAR yes 70810660
chr19 13958507 13958527 RREB1 JASPAR yes 112537891
chr19 13958507 13958528 ZNF263 JASPAR yes 70810661
chr19 13958507 13958528 ZNF263 JASPAR yes 112537892
Genes associated with rs55675854[chr19:13958508], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More