EnhancerDB
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  3. rs55681135[chr17:73336945]
Enhancers that have rs55681135[chr17:73336945]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 73329469 73350521 enh4601
Bone Marrow (K562) Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myotube) Neural Stem Cells (H9) Thymus Kidney
Transcript factors that have rs55681135[chr17:73336945]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 73336186 73337543 ZNF143 GTRD no Epithelial (MCF-7) 108294025
chr17 73336934 73336949 HNF1A JASPAR yes 55945268
chr17 73336935 73336948 HNF1B JASPAR yes 55945269
chr17 73336936 73336946 PAX3 JASPAR yes 55945270
chr17 73336936 73336946 PAX7 JASPAR yes 55945271
chr17 73336938 73336947 VENTX JASPAR yes 55945272
chr17 73336938 73336954 SOX8 JASPAR yes 55945273
chr17 73336942 73336951 SRY JASPAR yes 55945274
chr17 73336944 73336947 MYB TRANSFAC yes 55945275
chr17 73336944 73336960 SOX4 JASPAR yes 55945276
chr17 73336945 73336960 SOX21 JASPAR yes 55945277
Genes associated with rs55681135[chr17:73336945], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 72744791 72765492 + SLC9A3R1 ENSG00000109062.5 72744791 571453 Breast 0.388496 16224