EnhancerDB
  1. Home
  2. SNP
  3. rs556818163[chr2:39644519]
Enhancers that have rs556818163[chr2:39644519]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39624677 39646761 enh18467
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Liver Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs556818163[chr2:39644519]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39644512 39644522 SP1 JASPAR yes 73199048
chr2 39644512 39644531 PAX5 JASPAR yes 73199049
chr2 39644515 39644520 SP1 TRANSFAC yes 73199050
Genes associated with rs556818163[chr2:39644519], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More