EnhancerDB
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  3. rs556836777[chr6:25184042]
Enhancers that have rs556836777[chr6:25184042]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25163505 25184315 enh23129
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs556836777[chr6:25184042]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25184033 25184048 LEF1 JASPAR yes 100833088
chr6 25184034 25184048 TCF7L2 JASPAR yes 100833089
chr6 25184037 25184043 LEF1 TRANSFAC yes 100833090
chr6 25184037 25184043 SOX10 JASPAR yes 100833091
Genes associated with rs556836777[chr6:25184042], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More