EnhancerDB
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  3. rs556841605[chr19:13943923]
Enhancers that have rs556841605[chr19:13943923]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556841605[chr19:13943923]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13940633 13945906 POLR2A UCSC Txn Factor no Conserved 108389982
chr19 13940633 13945906 POLR2A UCSC Txn Factor no Conserved 108389983
chr19 13943848 13945696 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851599
chr19 13943848 13945696 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108389984
chr19 13943848 13945696 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108389985
chr19 13943896 13945645 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108389986
chr19 13943896 13945645 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108389987
chr19 13943906 13943927 ZNF263 JASPAR yes 112535595
chr19 13943909 13943923 PLAG1 JASPAR yes 112535596
chr19 13943909 13943924 NR2C2 JASPAR yes 112535597
chr19 13943910 13943924 PLAG1 JASPAR yes 112535599
chr19 13943915 13943930 NR2C2 JASPAR yes 112535602
chr19 13943915 13943935 PPARG JASPAR yes 112535603
chr19 13943918 13943928 SP1 JASPAR yes 112535604
chr19 13943920 13943925 ETS2 TRANSFAC yes 112535605
Genes associated with rs556841605[chr19:13943923], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More