EnhancerDB
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  3. rs556847353[chr17:65388328]
Enhancers that have rs556847353[chr17:65388328]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65375805 65390455 enh32308
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs556847353[chr17:65388328]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65388290 65389722 TEF1 GTRD no Bone (Osteoblast) 21782123
chr17 65388290 65389722 TEF1 GTRD no Bone (Osteoblast) 108285723
chr17 65388320 65388330 ELK1 JASPAR yes 55497533
chr17 65388320 65388330 ELK3 JASPAR yes 55497534
chr17 65388320 65388330 ETS1 JASPAR yes 55497535
chr17 65388320 65388330 ETV1 JASPAR yes 55497536
chr17 65388320 65388330 ETV4 JASPAR yes 55497537
chr17 65388320 65388330 FEV JASPAR yes 55497538
chr17 65388320 65388330 FLI1 JASPAR yes 55497539
chr17 65388321 65388330 ELK4 JASPAR yes 55497540
chr17 65388322 65388328 ETS1 JASPAR yes 55497541
chr17 65388322 65388328 SPI1 JASPAR yes 55497542
chr17 65388322 65388332 ELK1 JASPAR yes 55497543
Genes associated with rs556847353[chr17:65388328], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More