EnhancerDB
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  3. rs556862273[chr1:2196108]
Enhancers that have rs556862273[chr1:2196108]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2194994 2213473 enh11424
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs556862273[chr1:2196108]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2196088 2196109 REST JASPAR yes 26228974
chr1 2196093 2196109 ZNF143 JASPAR yes 26228975
chr1 2196096 2196114 MAFF JASPAR yes 26228976
chr1 2196098 2196109 NRL JASPAR yes 26228977
chr1 2196098 2196113 MAFK JASPAR yes 26228978
Genes associated with rs556862273[chr1:2196108], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More