EnhancerDB
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  3. rs556867608[chr1:27927380]
Enhancers that have rs556867608[chr1:27927380]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
chr1 27926949 27927449 vista936
VISTA
Transcript factors that have rs556867608[chr1:27927380]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27927369 27927384 HNF4G JASPAR yes 27714899
chr1 27927369 27927384 HNF4G JASPAR yes 118259084
chr1 27927374 27927380 SOX10 JASPAR yes 27714901
chr1 27927374 27927380 SOX10 JASPAR yes 118259086
Genes associated with rs556867608[chr1:27927380], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More