EnhancerDB
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  3. rs556868558[chr1:28750704]
Enhancers that have rs556868558[chr1:28750704]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28732865 28757735 enh186
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs556868558[chr1:28750704]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28750267 28752212 ZNF274 GTRD no Bone Marrow (K562) 107802660
chr1 28750689 28750705 POU4F3 JASPAR yes 27769737
chr1 28750690 28750706 POU4F2 JASPAR yes 27769750
chr1 28750690 28750706 POU4F3 JASPAR yes 27769751
chr1 28750692 28750706 POU4F1 JASPAR yes 27769754
chr1 28750692 28750707 HNF1A JASPAR yes 27769755
chr1 28750694 28750710 POU4F3 JASPAR yes 27769767
chr1 28750697 28750709 FOXC2 JASPAR yes 27769768
chr1 28750698 28750709 FOXC1 JASPAR yes 27769769
chr1 28750698 28750719 IRF1 JASPAR yes 27769770
chr1 28750700 28750715 FOXP1 JASPAR yes 27769772
chr1 28750703 28750718 MEF2A JASPAR yes 27769773
chr1 28750704 28750719 FOXP1 JASPAR yes 27769774
chr1 28750704 28750719 MEF2C JASPAR yes 27769775
Genes associated with rs556868558[chr1:28750704], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More