EnhancerDB
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  3. rs556889978[chr6:43869378]
Enhancers that have rs556889978[chr6:43869378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43862322 43897815 enh23256
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs556889978[chr6:43869378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43869370 43869385 TFAP2C JASPAR yes 101800206
chr6 43869372 43869384 TFAP2A JASPAR yes 101800208
chr6 43869372 43869384 TFAP2B JASPAR yes 101800209
chr6 43869372 43869384 TFAP2C JASPAR yes 101800210
chr6 43869372 43869387 TFAP2A JASPAR yes 101800211
Genes associated with rs556889978[chr6:43869378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More