EnhancerDB
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  3. rs55689005[chr6:13425179]
Enhancers that have rs55689005[chr6:13425179]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13417125 13443009 enh8962
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs55689005[chr6:13425179]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13425169 13425182 EOMES JASPAR yes 100029192
chr6 13425171 13425182 TBX2 JASPAR yes 100029193
chr6 13425172 13425182 TBX21 JASPAR yes 100029194
chr6 13425178 13425182 YY1 TRANSFAC yes 100029196
chr6 13425179 13425200 IRF1 JASPAR yes 100029197
Genes associated with rs55689005[chr6:13425179], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More