EnhancerDB
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  3. rs55689438[chr16:84766053]
Enhancers that have rs55689438[chr16:84766053]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 84750185 84777075 enh4172
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55689438[chr16:84766053]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 84766038 84766059 IRF1 JASPAR yes 11994623
chr16 84766041 84766055 SPI1 JASPAR yes 11994624
chr16 84766041 84766062 IRF1 JASPAR yes 11994625
chr16 84766044 84766058 SPI1 JASPAR yes 11994626
chr16 84766044 84766065 IRF1 JASPAR yes 11994627
chr16 84766046 84766067 IRF1 JASPAR yes 11994628
chr16 84766047 84766062 FOXP1 JASPAR yes 11994629
chr16 84766047 84766068 IRF1 JASPAR yes 11994630
chr16 84766048 84766069 IRF1 JASPAR yes 11994631
chr16 84766049 84766064 FOXP1 JASPAR yes 11994632
chr16 84766049 84766070 IRF1 JASPAR yes 11994633
chr16 84766050 84766065 FOXP1 JASPAR yes 11994634
chr16 84766051 84766066 FOXP1 JASPAR yes 11994635
chr16 84766052 84766067 FOXP1 JASPAR yes 11994636
chr16 84766053 84766068 FOXP1 JASPAR yes 11994637
Genes associated with rs55689438[chr16:84766053], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More