EnhancerDB
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  3. rs556934256[chr1:231518299]
Enhancers that have rs556934256[chr1:231518299]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs556934256[chr1:231518299]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231518284 231518300 RFX2 JASPAR yes 36086919
chr1 231518284 231518300 RFX3 JASPAR yes 36086920
chr1 231518284 231518300 RFX4 JASPAR yes 36086921
Genes associated with rs556934256[chr1:231518299], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More