EnhancerDB
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  3. rs556953539[chr11:69257309]
Enhancers that have rs556953539[chr11:69257309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 69240265 69271075 enh14035
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556953539[chr11:69257309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 69256900 69257340 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21499542
chr11 69256900 69257340 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107986121
chr11 69256991 69257373 ZNF143 GTRD no Epithelial (MCF-7) 21499543
chr11 69256991 69257373 ZNF143 GTRD no Epithelial (MCF-7) 107986122
chr11 69257028 69257378 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21499544
chr11 69257028 69257378 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107986123
chr11 69257298 69257309 TBX20 JASPAR yes 39535486
chr11 69257306 69257312 NFIC JASPAR yes 39535488
Genes associated with rs556953539[chr11:69257309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More