EnhancerDB
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  3. rs556999213[chr12:110752141]
Enhancers that have rs556999213[chr12:110752141]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 110736965 110760635 enh14987
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs556999213[chr12:110752141]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 110752128 110752143 MEF2C JASPAR yes 123691856
chr12 110752131 110752152 IRF1 JASPAR yes 123691857
chr12 110752135 110752150 FOXP1 JASPAR yes 123691858
chr12 110752135 110752156 IRF1 JASPAR yes 123691859
chr12 110752136 110752151 FOXP1 JASPAR yes 123691860
chr12 110752136 110752157 IRF1 JASPAR yes 123691861
chr12 110752137 110752152 FOXP1 JASPAR yes 123691862
chr12 110752137 110752158 IRF1 JASPAR yes 123691863
chr12 110752138 110752153 FOXP1 JASPAR yes 123691864
chr12 110752139 110752154 FOXP1 JASPAR yes 123691865
chr12 110752140 110752155 FOXP1 JASPAR yes 123691866
chr12 110752141 110752156 FOXP1 JASPAR yes 123691867
chr12 110752141 110752162 IRF1 JASPAR yes 123691868
Genes associated with rs556999213[chr12:110752141], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More