EnhancerDB
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  3. rs557078543[chr19:13288121]
Enhancers that have rs557078543[chr19:13288121]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557078543[chr19:13288121]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13288100 13288121 IRF1 JASPAR yes 112516350
chr19 13288103 13288124 IRF1 JASPAR yes 112516354
chr19 13288104 13288125 IRF1 JASPAR yes 112516356
Genes associated with rs557078543[chr19:13288121], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More