EnhancerDB
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  3. rs557098261[chr2:38942585]
Enhancers that have rs557098261[chr2:38942585]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs557098261[chr2:38942585]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38942575 38942590 FOXA1 JASPAR yes 73169001
chr2 38942576 38942588 FOXI1 JASPAR yes 73169002
chr2 38942576 38942591 FOXP1 JASPAR yes 73169003
chr2 38942577 38942588 FOXP2 JASPAR yes 73169004
chr2 38942577 38942589 FOXC2 JASPAR yes 73169005
chr2 38942577 38942591 FOXF2 JASPAR yes 73169006
chr2 38942578 38942586 FOXG1 JASPAR yes 73169007
chr2 38942578 38942586 FOXO3 JASPAR yes 73169008
chr2 38942578 38942589 FOXB1 JASPAR yes 73169009
chr2 38942578 38942589 FOXC1 JASPAR yes 73169010
chr2 38942579 38942590 FOXA1 JASPAR yes 73169011
chr2 38942580 38942600 RREB1 JASPAR yes 73169012
chr2 38942581 38942593 MEF2D JASPAR yes 73169013
chr2 38942583 38942587 YY1 TRANSFAC yes 73169014
chr2 38942585 38942599 IRF7 JASPAR yes 73169015
Genes associated with rs557098261[chr2:38942585], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More