EnhancerDB
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  3. rs557119562[chr1:210548107]
Enhancers that have rs557119562[chr1:210548107]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 210543485 210560329 enh27456
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Thyroid Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs557119562[chr1:210548107]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 210548101 210548122 IRF1 JASPAR yes 35023545
chr1 210548103 210548124 IRF1 JASPAR yes 35023546
chr1 210548104 210548119 FOXP1 JASPAR yes 35023547
chr1 210548104 210548125 IRF1 JASPAR yes 35023548
chr1 210548106 210548121 FOXP1 JASPAR yes 35023549
chr1 210548107 210548122 FOXP1 JASPAR yes 35023550
Genes associated with rs557119562[chr1:210548107], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More