EnhancerDB
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  3. rs557183234[chr17:27972650]
Enhancers that have rs557183234[chr17:27972650]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27963570 27975125 enh4328
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557183234[chr17:27972650]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27972521 27972965 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21749238
chr17 27972521 27972965 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108247404
chr17 27972629 27973039 GATA2 UCSC Txn Factor no Conserved 108247405
chr17 27972647 27972659 FOXI1 JASPAR yes 53745251
chr17 27972648 27972662 ONECUT3 JASPAR yes 53745252
chr17 27972650 27972654 YY1 TRANSFAC yes 53745253
Genes associated with rs557183234[chr17:27972650], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More