EnhancerDB
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  3. rs55718566[chr5:171409799]
Enhancers that have rs55718566[chr5:171409799]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171406325 171422095 enh38666
Skin (Keratinocyte) Prostate (PC-3) Esophagus Astrocyte Blood (GM12878) Stomach Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs55718566[chr5:171409799]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171409790 171409801 ESRRA JASPAR yes 67754178
chr5 171409790 171409801 ESRRB JASPAR yes 67754179
chr5 171409791 171409799 NR4A2 JASPAR yes 67754180
chr5 171409792 171409809 RARA JASPAR yes 67754181
Genes associated with rs55718566[chr5:171409799], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More