EnhancerDB
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  3. rs557188356[chr12:58287580]
Enhancers that have rs557188356[chr12:58287580]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58279727 58295915 enh2398
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557188356[chr12:58287580]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58287443 58287879 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21551637
chr12 58287485 58288209 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21551638
chr12 58287512 58287882 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21551639
chr12 58287530 58287826 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21551640
chr12 58287532 58287868 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21551641
chr12 58287538 58288058 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21551642
chr12 58287544 58287844 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21551643
chr12 58287550 58287860 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21551644
chr12 58287566 58287586 TP53 JASPAR yes 121148125
chr12 58287573 58288093 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21551645
chr12 58287578 58287585 PEA3 TRANSFAC yes 121148126
Genes associated with rs557188356[chr12:58287580], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More