EnhancerDB
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  3. rs557240646[chr2:39643137]
Enhancers that have rs557240646[chr2:39643137]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39624677 39646761 enh18467
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Liver Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs557240646[chr2:39643137]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39643126 39643137 FOXB1 JASPAR yes 73198803
chr2 39643127 39643138 FOXB1 JASPAR yes 73198804
chr2 39643128 39643139 FOXB1 JASPAR yes 73198806
chr2 39643129 39643140 FOXB1 JASPAR yes 73198807
chr2 39643130 39643138 FOXL1 JASPAR yes 73198808
chr2 39643130 39643141 FOXB1 JASPAR yes 73198809
chr2 39643131 39643142 FOXB1 JASPAR yes 73198810
chr2 39643132 39643140 FOXL1 JASPAR yes 73198811
chr2 39643132 39643143 FOXB1 JASPAR yes 73198812
chr2 39643133 39643144 FOXB1 JASPAR yes 73198813
chr2 39643134 39643142 FOXL1 JASPAR yes 73198814
chr2 39643134 39643145 FOXB1 JASPAR yes 73198815
chr2 39643135 39643146 FOXB1 JASPAR yes 73198816
chr2 39643136 39643144 FOXL1 JASPAR yes 73198817
chr2 39643136 39643148 MEF2A JASPAR yes 73198818
chr2 39643137 39643147 MEF2A JASPAR yes 73198819
Genes associated with rs557240646[chr2:39643137], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More