EnhancerDB
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  3. rs557241942[chr16:25061473]
Enhancers that have rs557241942[chr16:25061473]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 25036065 25069195 enh3955
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs557241942[chr16:25061473]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25060384 25061497 ZNF274 GTRD no Bone Marrow (K562) 21700034
chr16 25060384 25061497 ZNF274 GTRD no Bone Marrow (K562) 108189657
chr16 25060578 25061634 ZNF274 GTRD no Blood (GM12878) 21700036
chr16 25060578 25061634 ZNF274 GTRD no Blood (GM12878) 108189658
chr16 25060883 25061537 EP300 UCSC Txn Factor no Conserved 108189679
chr16 25060914 25061484 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21700060
chr16 25060914 25061484 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108189686
chr16 25060993 25061497 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108189697
chr16 25061019 25061503 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108189699
chr16 25061026 25061542 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21700070
chr16 25061026 25061542 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108189701
chr16 25061054 25061584 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21700072
chr16 25061054 25061584 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108189703
chr16 25061397 25061856 ZNF274 GTRD no Bone Marrow (K562) 21700076
chr16 25061458 25062082 ZNF274 GTRD no Blood (GM12878) 21700077
chr16 25061461 25061482 IRF1 JASPAR yes 10099998
chr16 25061467 25061488 IRF1 JASPAR yes 10099999
chr16 25061468 25061489 IRF1 JASPAR yes 10100000
chr16 25061469 25061484 STAT2 JASPAR yes 10100001
chr16 25061470 25061484 STAT1 JASPAR yes 10100002
chr16 25061472 25061487 FOXP1 JASPAR yes 10100003
chr16 25061472 25061493 IRF1 JASPAR yes 10100004
chr16 25061473 25061488 FOXP1 JASPAR yes 10100005
chr16 25061473 25061494 IRF1 JASPAR yes 10100006
Genes associated with rs557241942[chr16:25061473], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More