EnhancerDB
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  3. rs55726392[chr12:125391812]
Enhancers that have rs55726392[chr12:125391812]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125380716 125396135 enh2679
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs55726392[chr12:125391812]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125391809 125391824 FOXP1 JASPAR yes 124432362
chr12 125391810 125391825 FOXP1 JASPAR yes 124432363
chr12 125391811 125391817 TBP TRANSFAC yes 124432364
chr12 125391811 125391826 FOXP1 JASPAR yes 124432365
chr12 125391811 125391832 IRF1 JASPAR yes 124432366
chr12 125391812 125391827 FOXP1 JASPAR yes 124432367
chr12 125391812 125391833 IRF1 JASPAR yes 124432368
Genes associated with rs55726392[chr12:125391812], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More