EnhancerDB
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  3. rs557268524[chr1:25046299]
Enhancers that have rs557268524[chr1:25046299]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557268524[chr1:25046299]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25046292 25046302 SREBF2 JASPAR yes 27522699
chr1 25046292 25046303 USF1 JASPAR yes 27522700
chr1 25046292 25046303 USF2 JASPAR yes 27522701
Genes associated with rs557268524[chr1:25046299], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More