EnhancerDB
  1. Home
  2. SNP
  3. rs55732277[chr17:38710039]
Enhancers that have rs55732277[chr17:38710039]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55732277[chr17:38710039]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756012
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256529
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256530
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256531
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256532
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256533
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256534
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256535
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256536
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256537
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256538
chr17 38708884 38710263 ZBTB33 GTRD no Lung (A549) 108256691
chr17 38709029 38711415 ZNF274 GTRD no Liver (HepG2) 21756106
chr17 38709029 38711415 ZNF274 GTRD no Liver (HepG2) 108256693
chr17 38709318 38710130 ZNF274 GTRD no Blood (GM12878) 21756111
chr17 38709502 38710188 ZNF274 GTRD no Blood (GM12878) 21756118
chr17 38709707 38710137 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756122
chr17 38709707 38712651 ZNF274 GTRD no Bone Marrow (K562) 21756123
chr17 38709879 38710315 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756124
chr17 38709888 38710324 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756125
chr17 38710033 38710054 IRF1 JASPAR yes 54225704
chr17 38710035 38710050 PRDM1 JASPAR yes 54225705
chr17 38710035 38710050 STAT2 JASPAR yes 54225706
chr17 38710037 38710058 IRF1 JASPAR yes 54225707
chr17 38710038 38710053 FOXP1 JASPAR yes 54225708
chr17 38710038 38710059 IRF1 JASPAR yes 54225709
chr17 38710039 38710054 FOXP1 JASPAR yes 54225710
chr17 38710039 38710060 IRF1 JASPAR yes 54225711
Genes associated with rs55732277[chr17:38710039], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More