EnhancerDB
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  3. rs55751087[chr1:225631207]
Enhancers that have rs55751087[chr1:225631207]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55751087[chr1:225631207]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225631204 225631223 PAX5 JASPAR yes 35740701
Genes associated with rs55751087[chr1:225631207], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 226170403 226187032 - SDE2 ENSG00000143751.9 226187032 539196 Ovary 0.375852 1895
chr1 225589204 225616627 - LBR ENSG00000143815.10 225616627 14580 Thyroid 8.76084e-05 1885
chr1 225589204 225616627 - LBR ENSG00000143815.10 225616627 14580 Stomach 0.06327 1885