EnhancerDB
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  3. rs557516558[chr11:19975201]
Enhancers that have rs557516558[chr11:19975201]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 19970665 19987395 enh13835
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs557516558[chr11:19975201]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 19971910 19976711 ZNF274 GTRD no Bone Marrow (K562) 107961388
chr11 19975195 19975213 IRF2 JASPAR yes 37818587
chr11 19975200 19975212 IRF1 JASPAR yes 37818588
chr11 19975200 19975214 IRF7 JASPAR yes 37818589
chr11 19975200 19975215 IRF9 JASPAR yes 37818590
Genes associated with rs557516558[chr11:19975201], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More