-
Home
- SNP
- rs55753058[chr12:54004225]
Enhancers that have rs55753058[chr12:54004225]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
53982465 |
54005455 |
enh2370 |
|
|
Transcript factors that have rs55753058[chr12:54004225]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
54004218
|
54004228
|
ID4
|
JASPAR
|
yes
|
|
120997245
|
|
|
chr12
|
54004218
|
54004228
|
TCF3
|
JASPAR
|
yes
|
|
120997246
|
|
|
chr12
|
54004218
|
54004228
|
TCF4
|
JASPAR
|
yes
|
|
120997247
|
|
|
chr12
|
54004219
|
54004228
|
SNAI2
|
JASPAR
|
yes
|
|
120997248
|
|
|
chr12
|
54004220
|
54004225
|
USF2
|
TRANSFAC
|
yes
|
|
120997249
|
|
Genes associated with rs55753058[chr12:54004225], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr12
|
53689075
|
53693234
|
+
|
PFDN5
|
ENSG00000123349.9
|
53689075
|
310991
|
Stomach
|
0.296664
|
12118
|
|