EnhancerDB
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  3. rs557547088[chr5:14220173]
Enhancers that have rs557547088[chr5:14220173]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 14197965 14242825 enh22053
Brain (SK-N-MC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs557547088[chr5:14220173]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 14220152 14220173 IRF1 JASPAR yes 61025570
chr5 14220153 14220174 IRF1 JASPAR yes 61025571
chr5 14220158 14220173 FOXP1 JASPAR yes 61025574
chr5 14220159 14220174 FOXP1 JASPAR yes 61025575
chr5 14220160 14220175 FOXP1 JASPAR yes 61025576
chr5 14220161 14220176 FOXP1 JASPAR yes 61025577
chr5 14220163 14220178 MEF2C JASPAR yes 61025578
Genes associated with rs557547088[chr5:14220173], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More