EnhancerDB
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  3. rs557555191[chr12:109227289]
Enhancers that have rs557555191[chr12:109227289]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109212325 109229815 enh14978
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Uterus Blood (T-cell) Heart
chr12 109227089 109227462 vista14838
VISTA
Transcript factors that have rs557555191[chr12:109227289]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109226703 109227665 POLR2A UCSC Txn Factor no Conserved 108057666
chr12 109226839 109227369 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571774
chr12 109226839 109227369 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057667
chr12 109226932 109227408 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571775
chr12 109226932 109227408 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057668
chr12 109227023 109227539 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571776
chr12 109227023 109227539 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057669
chr12 109227044 109227508 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108057670
chr12 109227053 109227409 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571777
chr12 109227053 109227409 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057671
chr12 109227053 109227587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571778
chr12 109227053 109227587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057672
chr12 109227062 109227472 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108057673
chr12 109227069 109227413 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571779
chr12 109227069 109227413 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057674
chr12 109227078 109227418 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571780
chr12 109227078 109227418 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057675
chr12 109227093 109227557 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571781
chr12 109227093 109227557 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057676
chr12 109227096 109227426 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571782
chr12 109227096 109227426 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057677
chr12 109227102 109227422 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571783
chr12 109227102 109227422 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057678
chr12 109227134 109227364 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571784
chr12 109227134 109227364 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057679
chr12 109227142 109227680 ZNF143 GTRD no Epithelial (MCF-7) 108057680
chr12 109227148 109227404 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571785
chr12 109227148 109227404 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057681
chr12 109227279 109227290 RUNX1 JASPAR yes 82474178
chr12 109227279 109227290 RUNX1 JASPAR yes 123624568
chr12 109227289 109227293 YY1 TRANSFAC yes 82474179
chr12 109227289 109227293 YY1 TRANSFAC yes 123624569
Genes associated with rs557555191[chr12:109227289], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More