EnhancerDB
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  3. rs557590129[chr16:11711279]
Enhancers that have rs557590129[chr16:11711279]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11694149 11728755 enh16539
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs557590129[chr16:11711279]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11711274 11711295 IRF1 JASPAR yes 9526057
chr16 11711276 11711297 IRF1 JASPAR yes 9526058
chr16 11711277 11711298 IRF1 JASPAR yes 9526059
chr16 11711278 11711299 IRF1 JASPAR yes 9526060
chr16 11711279 11711294 FOXP1 JASPAR yes 9526061
chr16 11711279 11711300 IRF1 JASPAR yes 9526062
Genes associated with rs557590129[chr16:11711279], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More