EnhancerDB
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  3. rs557596181[chr2:38931580]
Enhancers that have rs557596181[chr2:38931580]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs557596181[chr2:38931580]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38931577 38931588 E2F1 JASPAR yes 73167529
chr2 38931578 38931583 SP1 TRANSFAC yes 73167530
chr2 38931578 38931589 E2F4 JASPAR yes 73167531
chr2 38931578 38931589 E2F6 JASPAR yes 73167532
chr2 38931579 38931584 SP1 TRANSFAC yes 73167533
Genes associated with rs557596181[chr2:38931580], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More