EnhancerDB
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  3. rs557610612[chr16:87817223]
Enhancers that have rs557610612[chr16:87817223]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87806255 87830395 enh4179
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs557610612[chr16:87817223]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87817214 87817235 REST JASPAR yes 12238876
chr16 87817215 87817234 REST JASPAR yes 12238877
chr16 87817217 87817226 HIC2 JASPAR yes 12238878
chr16 87817219 87817229 SP1 JASPAR yes 12238879
chr16 87817220 87817224 LFA1 TRANSFAC yes 12238880
chr16 87817220 87817240 TP63 JASPAR yes 12238881
Genes associated with rs557610612[chr16:87817223], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More