EnhancerDB
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  3. rs557626162[chr10:30099319]
Enhancers that have rs557626162[chr10:30099319]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 30090085 30104475 enh13099
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557626162[chr10:30099319]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 30098294 30099516 ZNF143 GTRD no Epithelial (MCF-7) 21424865
chr10 30098300 30099381 ZNF143 GTRD no Epithelial (MCF-7) 21424866
chr10 30098368 30099362 TEF1 GTRD no Bone (Osteoblast) 21424869
chr10 30098436 30099377 ZNF143 GTRD no Epithelial (MCF-7) 21424872
chr10 30099318 30099328 HOXA13 JASPAR yes 126352298
chr10 30099318 30099328 HOXB13 JASPAR yes 126352299
chr10 30099318 30099328 HOXD13 JASPAR yes 126352300
chr10 30099318 30099329 HOXC13 JASPAR yes 126352301
chr10 30099319 30099331 SRF JASPAR yes 126352302
Genes associated with rs557626162[chr10:30099319], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More