EnhancerDB
  1. Home
  2. SNP
  3. rs557627341[chr2:25508547]
Enhancers that have rs557627341[chr2:25508547]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25506105 25541255 enh18357
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs557627341[chr2:25508547]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25508539 25508554 PRDM1 JASPAR yes 72461711
chr2 25508541 25508562 IRF1 JASPAR yes 72461713
chr2 25508543 25508548 ETS2 TRANSFAC yes 72461714
Genes associated with rs557627341[chr2:25508547], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More