EnhancerDB
  1. Home
  2. SNP
  3. rs55775623[chr1:9496516]
Enhancers that have rs55775623[chr1:9496516]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9492342 9521379 enh11486
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs55775623[chr1:9496516]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9496511 9496526 HNF1A JASPAR yes 26650431
chr1 9496512 9496524 FOXC2 JASPAR yes 26650432
chr1 9496512 9496525 HNF1B JASPAR yes 26650433
chr1 9496512 9496526 ONECUT1 JASPAR yes 26650434
chr1 9496512 9496526 ONECUT2 JASPAR yes 26650435
chr1 9496512 9496526 ONECUT3 JASPAR yes 26650436
chr1 9496513 9496523 CUX1 JASPAR yes 26650437
chr1 9496513 9496523 CUX2 JASPAR yes 26650438
chr1 9496513 9496524 FOXB1 JASPAR yes 26650439
chr1 9496513 9496524 FOXC1 JASPAR yes 26650440
chr1 9496513 9496524 PHOX2A JASPAR yes 26650441
Genes associated with rs55775623[chr1:9496516], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More