EnhancerDB
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  3. rs557779563[chr1:9358338]
Enhancers that have rs557779563[chr1:9358338]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9355785 9365653 enh11482
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs557779563[chr1:9358338]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9358334 9358348 POU4F1 JASPAR yes 26635584
chr1 9358335 9358349 POU4F1 JASPAR yes 26635585
chr1 9358335 9358351 POU4F2 JASPAR yes 26635586
chr1 9358335 9358351 POU4F3 JASPAR yes 26635587
chr1 9358338 9358348 GSX2 JASPAR yes 26635588
chr1 9358338 9358348 HOXB2 JASPAR yes 26635589
chr1 9358338 9358348 HOXB3 JASPAR yes 26635590
chr1 9358338 9358348 MNX1 JASPAR yes 26635591
chr1 9358338 9358348 POU6F1 JASPAR yes 26635592
chr1 9358338 9358349 HOXA10 JASPAR yes 26635593
Genes associated with rs557779563[chr1:9358338], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More