EnhancerDB
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  3. rs557807775[chr19:2548495]
Enhancers that have rs557807775[chr19:2548495]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557807775[chr19:2548495]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2548477 2548498 IRF1 JASPAR yes 112073060
chr19 2548478 2548499 IRF1 JASPAR yes 112073062
chr19 2548479 2548500 IRF1 JASPAR yes 112073064
chr19 2548480 2548495 FOXP1 JASPAR yes 112073065
chr19 2548480 2548501 IRF1 JASPAR yes 112073066
chr19 2548481 2548496 FOXP1 JASPAR yes 112073067
chr19 2548481 2548502 IRF1 JASPAR yes 112073068
chr19 2548482 2548497 FOXP1 JASPAR yes 112073069
chr19 2548482 2548503 IRF1 JASPAR yes 112073070
chr19 2548483 2548498 FOXP1 JASPAR yes 112073071
chr19 2548483 2548504 IRF1 JASPAR yes 112073072
chr19 2548484 2548499 FOXP1 JASPAR yes 112073073
chr19 2548485 2548500 FOXP1 JASPAR yes 112073074
chr19 2548485 2548506 IRF1 JASPAR yes 112073075
chr19 2548486 2548501 FOXP1 JASPAR yes 112073076
chr19 2548486 2548507 IRF1 JASPAR yes 112073077
chr19 2548487 2548502 FOXP1 JASPAR yes 112073078
chr19 2548490 2548505 STAT2 JASPAR yes 112073079
Genes associated with rs557807775[chr19:2548495], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More