EnhancerDB
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  3. rs557825459[chr1:92273835]
Enhancers that have rs557825459[chr1:92273835]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 92266805 92278555 enh12038
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Bone (Osteoblast) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Uterus Thymus Heart
chr1 92271540 92273987 vista93
VISTA
Transcript factors that have rs557825459[chr1:92273835]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 92273832 92273842 ALX3 JASPAR yes 30726492
chr1 92273832 92273842 GSX2 JASPAR yes 30726493
chr1 92273832 92273842 MIXL1 JASPAR yes 30726494
chr1 92273832 92273842 MNX1 JASPAR yes 30726495
chr1 92273832 92273842 ALX3 JASPAR yes 71144187
chr1 92273832 92273842 GSX2 JASPAR yes 71144188
chr1 92273832 92273842 MIXL1 JASPAR yes 71144189
chr1 92273832 92273842 MNX1 JASPAR yes 71144190
chr1 92273833 92273841 ISX JASPAR yes 30726496
chr1 92273833 92273841 LMX1A JASPAR yes 30726497
chr1 92273833 92273841 LMX1B JASPAR yes 30726498
chr1 92273833 92273841 NKX6-1 JASPAR yes 30726499
chr1 92273833 92273841 NKX6-2 JASPAR yes 30726500
chr1 92273833 92273841 PRRX1 JASPAR yes 30726501
chr1 92273833 92273841 RAX2 JASPAR yes 30726502
chr1 92273833 92273841 SHOX JASPAR yes 30726503
chr1 92273833 92273841 UNCX JASPAR yes 30726504
chr1 92273833 92273841 VAX1 JASPAR yes 30726505
chr1 92273833 92273841 ISX JASPAR yes 71144191
chr1 92273833 92273841 LMX1A JASPAR yes 71144192
chr1 92273833 92273841 LMX1B JASPAR yes 71144193
chr1 92273833 92273841 NKX6-1 JASPAR yes 71144194
chr1 92273833 92273841 NKX6-2 JASPAR yes 71144195
chr1 92273833 92273841 PRRX1 JASPAR yes 71144196
chr1 92273833 92273841 RAX2 JASPAR yes 71144197
chr1 92273833 92273841 SHOX JASPAR yes 71144198
chr1 92273833 92273841 UNCX JASPAR yes 71144199
chr1 92273833 92273841 VAX1 JASPAR yes 71144200
chr1 92273833 92273846 DUXA JASPAR yes 30726506
chr1 92273833 92273846 DUXA JASPAR yes 71144201
chr1 92273834 92273845 DUX4 JASPAR yes 30726507
chr1 92273834 92273845 PHOX2A JASPAR yes 30726508
chr1 92273834 92273845 PROP1 JASPAR yes 30726509
chr1 92273834 92273845 DUX4 JASPAR yes 71144202
chr1 92273834 92273845 PHOX2A JASPAR yes 71144203
chr1 92273834 92273845 PROP1 JASPAR yes 71144204
Genes associated with rs557825459[chr1:92273835], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More