EnhancerDB
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  3. rs557829641[chr1:8544488]
Enhancers that have rs557829641[chr1:8544488]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557829641[chr1:8544488]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8544478 8544488 HOXB13 JASPAR yes 26561249
chr1 8544482 8544503 IRF1 JASPAR yes 26561250
chr1 8544484 8544499 PRDM1 JASPAR yes 26561251
chr1 8544484 8544499 STAT2 JASPAR yes 26561252
chr1 8544487 8544502 FOXP1 JASPAR yes 26561253
chr1 8544488 8544503 FOXP1 JASPAR yes 26561254
Genes associated with rs557829641[chr1:8544488], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More