EnhancerDB
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  3. rs557836667[chr2:28872909]
Enhancers that have rs557836667[chr2:28872909]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557836667[chr2:28872909]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28872895 28872910 HSF1 JASPAR yes 72664184
chr2 28872895 28872911 ZNF143 JASPAR yes 72664185
chr2 28872905 28872920 SCRT1 JASPAR yes 72664186
chr2 28872909 28872918 SNAI2 JASPAR yes 72664187
chr2 28872909 28872919 ID4 JASPAR yes 72664188
chr2 28872909 28872919 TCF3 JASPAR yes 72664189
chr2 28872909 28872919 TCF4 JASPAR yes 72664190
Genes associated with rs557836667[chr2:28872909], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More