EnhancerDB
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  3. rs557846098[chr17:57925708]
Enhancers that have rs557846098[chr17:57925708]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57915645 57936791 enh17263
Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557846098[chr17:57925708]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57924302 57928498 ZNF143 GTRD no Epithelial (MCF-7) 21776758
chr17 57924302 57928498 ZNF143 GTRD no Epithelial (MCF-7) 108278390
chr17 57925167 57926604 ZNF143 GTRD no Epithelial (MCF-7) 21776766
chr17 57925167 57926604 ZNF143 GTRD no Epithelial (MCF-7) 108278398
chr17 57925178 57925829 ZNF274 GTRD no Blood (GM12878) 21776767
chr17 57925178 57925829 ZNF274 GTRD no Blood (GM12878) 108278399
chr17 57925197 57925845 ZNF143 GTRD no Epithelial (MCF-7) 21776768
chr17 57925197 57925845 ZNF143 GTRD no Epithelial (MCF-7) 108278400
chr17 57925230 57926633 ZNF143 GTRD no Epithelial (MCF-7) 21776770
chr17 57925230 57926633 ZNF143 GTRD no Epithelial (MCF-7) 108278402
chr17 57925235 57926421 ZNF143 GTRD no Epithelial (MCF-7) 21776771
chr17 57925235 57926421 ZNF143 GTRD no Epithelial (MCF-7) 108278404
chr17 57925242 57926544 TCF7L2 GTRD no Colon (HCT116) 108278405
chr17 57925243 57926136 TCF7L2 GTRD no Colon (HCT116) 108278406
chr17 57925246 57926086 ZNF143 GTRD no Epithelial (MCF-7) 21776772
chr17 57925246 57926086 ZNF143 GTRD no Epithelial (MCF-7) 108278407
chr17 57925279 57926393 TCF7L2 GTRD no Colon (HCT116) 108278408
chr17 57925290 57925762 ZNF274 GTRD no Blood (GM12878) 21776773
chr17 57925290 57925762 ZNF274 GTRD no Blood (GM12878) 108278409
chr17 57925363 57926022 MEF2B GTRD no Blood (Karpas-422) 108278410
chr17 57925378 57926614 ZBTB33 GTRD no Lung (A549) 108278411
chr17 57925698 57925711 NFKB1 JASPAR yes 55088612
chr17 57925698 57925711 NFKB2 JASPAR yes 55088613
chr17 57925706 57925711 MYC TRANSFAC yes 55088614
Genes associated with rs557846098[chr17:57925708], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More