EnhancerDB
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  3. rs55785704[chr1:110329214]
Enhancers that have rs55785704[chr1:110329214]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110323180 110341767 enh12126
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55785704[chr1:110329214]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110327966 110329312 ZNF274 GTRD no Bone Marrow (K562) 21327123
chr1 110327999 110329279 ZNF274 GTRD no Bone Marrow (K562) 21327125
chr1 110328051 110329237 ZNF274 GTRD no Bone Marrow (K562) 21327130
chr1 110328564 110329245 ZNF274 GTRD no Bone Marrow (K562) 21327142
chr1 110329159 110329555 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21327145
chr1 110329210 110329440 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21327146
chr1 110329213 110329227 TLX1 JASPAR yes 31438203
chr1 110329214 110329218 H4TF2 TRANSFAC yes 31438204
Genes associated with rs55785704[chr1:110329214], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More