EnhancerDB
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  3. rs557872611[chr17:78756560]
Enhancers that have rs557872611[chr17:78756560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs557872611[chr17:78756560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78756410 78756930 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21797330
chr17 78756410 78756930 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108307593
chr17 78756548 78756569 REST JASPAR yes 56278818
chr17 78756557 78756568 ELK4 JASPAR yes 56278820
chr17 78756557 78756568 FLI1 JASPAR yes 56278821
chr17 78756558 78756568 ETV6 JASPAR yes 56278822
chr17 78756558 78756571 ELF1 JASPAR yes 56278823
chr17 78756559 78756566 SPI1 JASPAR yes 56278824
chr17 78756559 78756567 EHF JASPAR yes 56278825
chr17 78756559 78756567 FEV JASPAR yes 56278826
Genes associated with rs557872611[chr17:78756560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More