EnhancerDB
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  3. rs55788020[chr16:69575089]
Enhancers that have rs55788020[chr16:69575089]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 69559096 69575635 enh4114
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs55788020[chr16:69575089]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 69575083 69575094 BATF JASPAR yes 11279569
chr16 69575086 69575101 FOXP1 JASPAR yes 11279570
chr16 69575087 69575102 FOXP1 JASPAR yes 11279571
chr16 69575088 69575103 FOXP1 JASPAR yes 11279572
chr16 69575088 69575109 IRF1 JASPAR yes 11279573
chr16 69575089 69575104 FOXP1 JASPAR yes 11279574
chr16 69575089 69575110 IRF1 JASPAR yes 11279575
Genes associated with rs55788020[chr16:69575089], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More