EnhancerDB
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  3. rs55788448[chr12:121289244]
Enhancers that have rs55788448[chr12:121289244]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 121282565 121298722 enh2642
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673)
Transcript factors that have rs55788448[chr12:121289244]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 121289237 121289248 BATF JASPAR yes 124189423
chr12 121289239 121289259 RREB1 JASPAR yes 124189424
chr12 121289242 121289246 YY1 TRANSFAC yes 124189425
Genes associated with rs55788448[chr12:121289244], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More